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Cluster: HRGMv2_4420_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4420_27 HRGMv2_4420_27_1 322 2289 + GH36
pfam HRGMv2_4420_27 HRGMv2_4420_27_2 2382 3164 + Lipase_GDSL | Lipase_GDSL_2
NULL(UNKNOWN) HRGMv2_4420_27 HRGMv2_4420_27_3 3750 4013 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4420_27 HRGMv2_4420_27_4 4340 5095 + 2.A.79.1.5
pfam HRGMv2_4420_27 HRGMv2_4420_27_5 5092 5541 + ThrE | ThrE_2
pfam HRGMv2_4420_27 HRGMv2_4420_27_6 5726 6313 + DUF3267
TC HRGMv2_4420_27 HRGMv2_4420_27_7 6643 7764 + 3.A.1.11.8
TC HRGMv2_4420_27 HRGMv2_4420_27_8 7761 8603 + 3.A.1.11.8
TC HRGMv2_4420_27 HRGMv2_4420_27_9 8600 9400 + 3.A.1.11.2
TC HRGMv2_4420_27 HRGMv2_4420_27_10 9403 10512 + 3.A.1.11.7
Gene ID: HRGMv2_4420_27_1
Type: CAZyme
Location: 322 - 2289 (+)
Gene ID: HRGMv2_4420_27_2
Type: pfam
Location: 2382 - 3164 (+)
Gene ID: HRGMv2_4420_27_3
Type:
Location: 3750 - 4013 (+)
Gene ID: HRGMv2_4420_27_4
Type: TC
Location: 4340 - 5095 (+)
Gene ID: HRGMv2_4420_27_5
Type: pfam
Location: 5092 - 5541 (+)
Gene ID: HRGMv2_4420_27_6
Type: pfam
Location: 5726 - 6313 (+)
Gene ID: HRGMv2_4420_27_7
Type: TC
Location: 6643 - 7764 (+)
Gene ID: HRGMv2_4420_27_8
Type: TC
Location: 7761 - 8603 (+)
Gene ID: HRGMv2_4420_27_9
Type: TC
Location: 8600 - 9400 (+)
Gene ID: HRGMv2_4420_27_10
Type: TC
Location: 9403 - 10512 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
UMGS1279
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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