Cluster: HRGMv2_4420_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4420
- CGC Family ID: CGCFAM_01732
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4420_21 | HRGMv2_4420_21_12 | 11214 | 12818 | - | 3.A.1.147.6 |
| TC | HRGMv2_4420_21 | HRGMv2_4420_21_13 | 12815 | 13525 | - | 3.A.1.147.6 |
| STP | HRGMv2_4420_21 | HRGMv2_4420_21_14 | 13512 | 14189 | - | TetR_N |
| CAZyme | HRGMv2_4420_21 | HRGMv2_4420_21_15 | 14504 | 16093 | - | GH3 |
Gene ID: HRGMv2_4420_21_12
Type: TC
Location: 11214 - 12818 (-)
Type: TC
Location: 11214 - 12818 (-)
Gene ID: HRGMv2_4420_21_13
Type: TC
Location: 12815 - 13525 (-)
Type: TC
Location: 12815 - 13525 (-)
Gene ID: HRGMv2_4420_21_14
Type: STP
Location: 13512 - 14189 (-)
Type: STP
Location: 13512 - 14189 (-)
Gene ID: HRGMv2_4420_21_15
Type: CAZyme
Location: 14504 - 16093 (-)
Type: CAZyme
Location: 14504 - 16093 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.