Cluster: HRGMv2_4420_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4420
- CGC Family ID: CGCFAM_10612
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4420_3 | HRGMv2_4420_3_11 | 15467 | 16780 | + | GH4 |
| pfam | HRGMv2_4420_3 | HRGMv2_4420_3_12 | 16875 | 17762 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_9 |
| pfam | HRGMv2_4420_3 | HRGMv2_4420_3_13 | 17765 | 18685 | - | LPG_synthase_C |
| TC | HRGMv2_4420_3 | HRGMv2_4420_3_14 | 18860 | 19321 | - | 1.A.22.1.3 |
Gene ID: HRGMv2_4420_3_11
Type: CAZyme
Location: 15467 - 16780 (+)
Type: CAZyme
Location: 15467 - 16780 (+)
Gene ID: HRGMv2_4420_3_12
Type: pfam
Location: 16875 - 17762 (-)
Type: pfam
Location: 16875 - 17762 (-)
Gene ID: HRGMv2_4420_3_13
Type: pfam
Location: 17765 - 18685 (-)
Type: pfam
Location: 17765 - 18685 (-)
Gene ID: HRGMv2_4420_3_14
Type: TC
Location: 18860 - 19321 (-)
Type: TC
Location: 18860 - 19321 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.