Cluster: HRGMv2_4420_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4420
- CGC Family ID: CGCFAM_05713
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4420_177 | HRGMv2_4420_177_2 | 638 | 2254 | + | GH36 |
| pfam | HRGMv2_4420_177 | HRGMv2_4420_177_3 | 2405 | 2746 | - | PqqD |
| TC | HRGMv2_4420_177 | HRGMv2_4420_177_4 | 2749 | 3627 | - | 2.A.67.4.2 |
Gene ID: HRGMv2_4420_177_2
Type: CAZyme
Location: 638 - 2254 (+)
Type: CAZyme
Location: 638 - 2254 (+)
Gene ID: HRGMv2_4420_177_3
Type: pfam
Location: 2405 - 2746 (-)
Type: pfam
Location: 2405 - 2746 (-)
Gene ID: HRGMv2_4420_177_4
Type: TC
Location: 2749 - 3627 (-)
Type: TC
Location: 2749 - 3627 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.