Cluster: HRGMv2_4420_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4420
- CGC Family ID: CGCFAM_02139
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4420_1 | HRGMv2_4420_1_62 | 66158 | 67912 | - | GH2 |
| CAZyme | HRGMv2_4420_1 | HRGMv2_4420_1_63 | 68192 | 70084 | - | GH173 |
| pfam | HRGMv2_4420_1 | HRGMv2_4420_1_64 | 70589 | 71149 | + | G3P_antiterm |
| TC | HRGMv2_4420_1 | HRGMv2_4420_1_65 | 71276 | 71923 | + | 9.B.20.1.4 |
Gene ID: HRGMv2_4420_1_62
Type: CAZyme
Location: 66158 - 67912 (-)
Type: CAZyme
Location: 66158 - 67912 (-)
Gene ID: HRGMv2_4420_1_63
Type: CAZyme
Location: 68192 - 70084 (-)
Type: CAZyme
Location: 68192 - 70084 (-)
Gene ID: HRGMv2_4420_1_64
Type: pfam
Location: 70589 - 71149 (+)
Type: pfam
Location: 70589 - 71149 (+)
Gene ID: HRGMv2_4420_1_65
Type: TC
Location: 71276 - 71923 (+)
Type: TC
Location: 71276 - 71923 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.