Cluster: HRGMv2_4420_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4420
- CGC Family ID: CGCFAM_01677
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4420_100 | HRGMv2_4420_100_2 | 1313 | 2485 | + | GT4 |
| TC | HRGMv2_4420_100 | HRGMv2_4420_100_3 | 2584 | 3987 | - | 3.B.1.1.6 |
| TC | HRGMv2_4420_100 | HRGMv2_4420_100_4 | 4078 | 5253 | - | 3.B.1.1.6 |
| TC | HRGMv2_4420_100 | HRGMv2_4420_100_5 | 5266 | 5634 | - | 3.B.1.1.3 |
Gene ID: HRGMv2_4420_100_2
Type: CAZyme
Location: 1313 - 2485 (+)
Type: CAZyme
Location: 1313 - 2485 (+)
Gene ID: HRGMv2_4420_100_3
Type: TC
Location: 2584 - 3987 (-)
Type: TC
Location: 2584 - 3987 (-)
Gene ID: HRGMv2_4420_100_4
Type: TC
Location: 4078 - 5253 (-)
Type: TC
Location: 4078 - 5253 (-)
Gene ID: HRGMv2_4420_100_5
Type: TC
Location: 5266 - 5634 (-)
Type: TC
Location: 5266 - 5634 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4420_100_3 | vegetarian > vegan | 1.15095 | 0.00701 |