Cluster: HRGMv2_4420_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4420
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4420_55 | HRGMv2_4420_55_4 | 4144 | 5088 | - | GH25 |
| pfam | HRGMv2_4420_55 | HRGMv2_4420_55_5 | 5129 | 6214 | - | Lipase_GDSL_2 | Lipase_GDSL_3 | GxDLY |
| pfam | HRGMv2_4420_55 | HRGMv2_4420_55_6 | 6220 | 7314 | - | Lipase_GDSL_3 | GxDLY |
| TC | HRGMv2_4420_55 | HRGMv2_4420_55_7 | 7589 | 8200 | - | 8.A.59.4.1 |
| CAZyme | HRGMv2_4420_55 | HRGMv2_4420_55_8 | 8380 | 10197 | - | GH127 |
Gene ID: HRGMv2_4420_55_4
Type: CAZyme
Location: 4144 - 5088 (-)
Type: CAZyme
Location: 4144 - 5088 (-)
Gene ID: HRGMv2_4420_55_5
Type: pfam
Location: 5129 - 6214 (-)
Type: pfam
Location: 5129 - 6214 (-)
Gene ID: HRGMv2_4420_55_6
Type: pfam
Location: 6220 - 7314 (-)
Type: pfam
Location: 6220 - 7314 (-)
Gene ID: HRGMv2_4420_55_7
Type: TC
Location: 7589 - 8200 (-)
Type: TC
Location: 7589 - 8200 (-)
Gene ID: HRGMv2_4420_55_8
Type: CAZyme
Location: 8380 - 10197 (-)
Type: CAZyme
Location: 8380 - 10197 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.