Cluster: HRGMv2_4420_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4420
- CGC Family ID: CGCFAM_01759
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4420_49 | HRGMv2_4420_49_1 | 2 | 976 | + | 3.A.2.3.1 |
| TC | HRGMv2_4420_49 | HRGMv2_4420_49_2 | 973 | 2349 | + | 3.A.2.3.3 |
| TC | HRGMv2_4420_49 | HRGMv2_4420_49_3 | 2401 | 3015 | + | 3.A.2.3.2 |
| STP | HRGMv2_4420_49 | HRGMv2_4420_49_4 | 3168 | 5138 | + | Pkinase |
| CAZyme | HRGMv2_4420_49 | HRGMv2_4420_49_5 | 5666 | 7834 | - | GH173 |
Gene ID: HRGMv2_4420_49_1
Type: TC
Location: 2 - 976 (+)
Type: TC
Location: 2 - 976 (+)
Gene ID: HRGMv2_4420_49_2
Type: TC
Location: 973 - 2349 (+)
Type: TC
Location: 973 - 2349 (+)
Gene ID: HRGMv2_4420_49_3
Type: TC
Location: 2401 - 3015 (+)
Type: TC
Location: 2401 - 3015 (+)
Gene ID: HRGMv2_4420_49_4
Type: STP
Location: 3168 - 5138 (+)
Type: STP
Location: 3168 - 5138 (+)
Gene ID: HRGMv2_4420_49_5
Type: CAZyme
Location: 5666 - 7834 (-)
Type: CAZyme
Location: 5666 - 7834 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.