Cluster: HRGMv2_4420_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4420
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4420_31 | HRGMv2_4420_31_7 | 5872 | 8082 | + | GH36 |
| STP | HRGMv2_4420_31 | HRGMv2_4420_31_8 | 8121 | 9095 | + | HD |
| CAZyme | HRGMv2_4420_31 | HRGMv2_4420_31_9 | 9134 | 9979 | + | CE4 |
| pfam | HRGMv2_4420_31 | HRGMv2_4420_31_10 | 10059 | 10847 | - | F420_ligase |
| TC | HRGMv2_4420_31 | HRGMv2_4420_31_11 | 11035 | 12435 | - | 9.A.11.1.1 |
| TC | HRGMv2_4420_31 | HRGMv2_4420_31_12 | 12516 | 13907 | - | 2.A.66.1.34 |
Gene ID: HRGMv2_4420_31_7
Type: CAZyme
Location: 5872 - 8082 (+)
Type: CAZyme
Location: 5872 - 8082 (+)
Gene ID: HRGMv2_4420_31_8
Type: STP
Location: 8121 - 9095 (+)
Type: STP
Location: 8121 - 9095 (+)
Gene ID: HRGMv2_4420_31_9
Type: CAZyme
Location: 9134 - 9979 (+)
Type: CAZyme
Location: 9134 - 9979 (+)
Gene ID: HRGMv2_4420_31_10
Type: pfam
Location: 10059 - 10847 (-)
Type: pfam
Location: 10059 - 10847 (-)
Gene ID: HRGMv2_4420_31_11
Type: TC
Location: 11035 - 12435 (-)
Type: TC
Location: 11035 - 12435 (-)
Gene ID: HRGMv2_4420_31_12
Type: TC
Location: 12516 - 13907 (-)
Type: TC
Location: 12516 - 13907 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.