Cluster: HRGMv2_4420_CGC1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4420
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4420_1 | HRGMv2_4420_1_47 | 44039 | 45274 | - | 2.A.1.24.4 |
| pfam | HRGMv2_4420_1 | HRGMv2_4420_1_48 | 45271 | 46107 | - | Zn_dep_PLPC |
| TC | HRGMv2_4420_1 | HRGMv2_4420_1_49 | 46349 | 47050 | + | 3.A.1.122.14 |
| TC | HRGMv2_4420_1 | HRGMv2_4420_1_50 | 47064 | 50036 | + | 3.A.1.137.2 |
| TC | HRGMv2_4420_1 | HRGMv2_4420_1_51 | 50204 | 51847 | + | 2.A.103.1.7 |
| pfam | HRGMv2_4420_1 | HRGMv2_4420_1_52 | 51844 | 53184 | + | Transpeptidase |
| pfam | HRGMv2_4420_1 | HRGMv2_4420_1_53 | 53201 | 53587 | + | DUF2809 |
| CAZyme | HRGMv2_4420_1 | HRGMv2_4420_1_54 | 53732 | 56374 | + | CBM67 | GH78 |
Gene ID: HRGMv2_4420_1_47
Type: TC
Location: 44039 - 45274 (-)
Type: TC
Location: 44039 - 45274 (-)
Gene ID: HRGMv2_4420_1_48
Type: pfam
Location: 45271 - 46107 (-)
Type: pfam
Location: 45271 - 46107 (-)
Gene ID: HRGMv2_4420_1_49
Type: TC
Location: 46349 - 47050 (+)
Type: TC
Location: 46349 - 47050 (+)
Gene ID: HRGMv2_4420_1_50
Type: TC
Location: 47064 - 50036 (+)
Type: TC
Location: 47064 - 50036 (+)
Gene ID: HRGMv2_4420_1_51
Type: TC
Location: 50204 - 51847 (+)
Type: TC
Location: 50204 - 51847 (+)
Gene ID: HRGMv2_4420_1_52
Type: pfam
Location: 51844 - 53184 (+)
Type: pfam
Location: 51844 - 53184 (+)
Gene ID: HRGMv2_4420_1_53
Type: pfam
Location: 53201 - 53587 (+)
Type: pfam
Location: 53201 - 53587 (+)
Gene ID: HRGMv2_4420_1_54
Type: CAZyme
Location: 53732 - 56374 (+)
Type: CAZyme
Location: 53732 - 56374 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.