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Cluster: HRGMv2_4417_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4417_36 HRGMv2_4417_36_2 698 2212 + 3.A.2.1.5
TC HRGMv2_4417_36 HRGMv2_4417_36_3 2205 3092 + 3.A.2.1.5
TC HRGMv2_4417_36 HRGMv2_4417_36_4 3105 4499 + 3.A.2.1.5
TC HRGMv2_4417_36 HRGMv2_4417_36_5 4514 4924 + 3.A.2.1.5
pfam HRGMv2_4417_36 HRGMv2_4417_36_6 4956 5729 + RadC | UPF0758_N
pfam HRGMv2_4417_36 HRGMv2_4417_36_7 5817 6176 + Acetyltransf_1 | Acetyltransf_3
CAZyme HRGMv2_4417_36 HRGMv2_4417_36_8 6409 7884 - GH29
pfam HRGMv2_4417_36 HRGMv2_4417_36_9 8006 8548 + RNase_T
TC HRGMv2_4417_36 HRGMv2_4417_36_10 8554 9006 - 2.A.79.1.5
Gene ID: HRGMv2_4417_36_2
Type: TC
Location: 698 - 2212 (+)
Gene ID: HRGMv2_4417_36_3
Type: TC
Location: 2205 - 3092 (+)
Gene ID: HRGMv2_4417_36_4
Type: TC
Location: 3105 - 4499 (+)
Gene ID: HRGMv2_4417_36_5
Type: TC
Location: 4514 - 4924 (+)
Gene ID: HRGMv2_4417_36_6
Type: pfam
Location: 4956 - 5729 (+)
Gene ID: HRGMv2_4417_36_7
Type: pfam
Location: 5817 - 6176 (+)
Gene ID: HRGMv2_4417_36_8
Type: CAZyme
Location: 6409 - 7884 (-)
Gene ID: HRGMv2_4417_36_9
Type: pfam
Location: 8006 - 8548 (+)
Gene ID: HRGMv2_4417_36_10
Type: TC
Location: 8554 - 9006 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
Scybalenecus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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