Cluster: HRGMv2_4417_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4417
- CGC Family ID: CGCFAM_01939
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4417_32 | HRGMv2_4417_32_3 | 2395 | 3522 | - | CE9 |
| pfam | HRGMv2_4417_32 | HRGMv2_4417_32_4 | 3522 | 4487 | - | Dus |
| TC | HRGMv2_4417_32 | HRGMv2_4417_32_5 | 4584 | 5252 | - | 2.A.115.2.8 |
Gene ID: HRGMv2_4417_32_3
Type: CAZyme
Location: 2395 - 3522 (-)
Type: CAZyme
Location: 2395 - 3522 (-)
Gene ID: HRGMv2_4417_32_4
Type: pfam
Location: 3522 - 4487 (-)
Type: pfam
Location: 3522 - 4487 (-)
Gene ID: HRGMv2_4417_32_5
Type: TC
Location: 4584 - 5252 (-)
Type: TC
Location: 4584 - 5252 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.