Cluster: HRGMv2_4417_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4417
- CGC Family ID: CGCFAM_00103
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4417_124 | HRGMv2_4417_124_1 | 3 | 1118 | + | 2.A.2.3.3 |
| NULL(UNKNOWN) | HRGMv2_4417_124 | HRGMv2_4417_124_2 | 1164 | 2441 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4417_124 | HRGMv2_4417_124_3 | 2497 | 2760 | - | DUF6171 |
| CAZyme | HRGMv2_4417_124 | HRGMv2_4417_124_4 | 2760 | 4238 | - | GH51_1 |
Gene ID: HRGMv2_4417_124_1
Type: TC
Location: 3 - 1118 (+)
Type: TC
Location: 3 - 1118 (+)
Gene ID: HRGMv2_4417_124_2
Type:
Location: 1164 - 2441 (-)
Type:
Location: 1164 - 2441 (-)
Gene ID: HRGMv2_4417_124_3
Type: pfam
Location: 2497 - 2760 (-)
Type: pfam
Location: 2497 - 2760 (-)
Gene ID: HRGMv2_4417_124_4
Type: CAZyme
Location: 2760 - 4238 (-)
Type: CAZyme
Location: 2760 - 4238 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.