Cluster: HRGMv2_4417_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4417
- CGC Family ID: CGCFAM_01348
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4417_123 | HRGMv2_4417_123_1 | 3 | 1643 | + | GH2 |
| TC | HRGMv2_4417_123 | HRGMv2_4417_123_2 | 2038 | 3480 | + | 2.A.25.1.4 |
| STP | HRGMv2_4417_123 | HRGMv2_4417_123_3 | 3669 | 4535 | + | SBP_bac_3 |
| TC | HRGMv2_4417_123 | HRGMv2_4417_123_4 | 4619 | 5329 | + | 3.A.1.3.15 |
| TC | HRGMv2_4417_123 | HRGMv2_4417_123_5 | 5313 | 6035 | + | 3.A.1.3.25 |
Gene ID: HRGMv2_4417_123_1
Type: CAZyme
Location: 3 - 1643 (+)
Type: CAZyme
Location: 3 - 1643 (+)
Gene ID: HRGMv2_4417_123_2
Type: TC
Location: 2038 - 3480 (+)
Type: TC
Location: 2038 - 3480 (+)
Gene ID: HRGMv2_4417_123_3
Type: STP
Location: 3669 - 4535 (+)
Type: STP
Location: 3669 - 4535 (+)
Gene ID: HRGMv2_4417_123_4
Type: TC
Location: 4619 - 5329 (+)
Type: TC
Location: 4619 - 5329 (+)
Gene ID: HRGMv2_4417_123_5
Type: TC
Location: 5313 - 6035 (+)
Type: TC
Location: 5313 - 6035 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.