Cluster: HRGMv2_4417_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4417
- CGC Family ID: CGCFAM_10611
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4417_91 | HRGMv2_4417_91_3 | 1378 | 2676 | + | GH33 |
| pfam | HRGMv2_4417_91 | HRGMv2_4417_91_4 | 2693 | 5170 | + | MFS_2 |
| pfam | HRGMv2_4417_91 | HRGMv2_4417_91_5 | 5372 | 5986 | + | NEAT |
| TC | HRGMv2_4417_91 | HRGMv2_4417_91_6 | 6011 | 7753 | + | 3.A.1.106.12 |
Gene ID: HRGMv2_4417_91_3
Type: CAZyme
Location: 1378 - 2676 (+)
Type: CAZyme
Location: 1378 - 2676 (+)
Gene ID: HRGMv2_4417_91_4
Type: pfam
Location: 2693 - 5170 (+)
Type: pfam
Location: 2693 - 5170 (+)
Gene ID: HRGMv2_4417_91_5
Type: pfam
Location: 5372 - 5986 (+)
Type: pfam
Location: 5372 - 5986 (+)
Gene ID: HRGMv2_4417_91_6
Type: TC
Location: 6011 - 7753 (+)
Type: TC
Location: 6011 - 7753 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.