Cluster: HRGMv2_4417_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4417
- CGC Family ID: CGCFAM_02831
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4417_72 | HRGMv2_4417_72_3 | 3139 | 5820 | - | GH95 |
| STP | HRGMv2_4417_72 | HRGMv2_4417_72_4 | 5907 | 6584 | + | AraC_binding |
| pfam | HRGMv2_4417_72 | HRGMv2_4417_72_5 | 7084 | 8097 | + | ABC_sub_bind |
| TC | HRGMv2_4417_72 | HRGMv2_4417_72_6 | 8130 | 9059 | + | 3.A.1.34.1 |
| TC | HRGMv2_4417_72 | HRGMv2_4417_72_7 | 9046 | 9819 | + | 3.A.1.34.1 |
Gene ID: HRGMv2_4417_72_3
Type: CAZyme
Location: 3139 - 5820 (-)
Type: CAZyme
Location: 3139 - 5820 (-)
Gene ID: HRGMv2_4417_72_4
Type: STP
Location: 5907 - 6584 (+)
Type: STP
Location: 5907 - 6584 (+)
Gene ID: HRGMv2_4417_72_5
Type: pfam
Location: 7084 - 8097 (+)
Type: pfam
Location: 7084 - 8097 (+)
Gene ID: HRGMv2_4417_72_6
Type: TC
Location: 8130 - 9059 (+)
Type: TC
Location: 8130 - 9059 (+)
Gene ID: HRGMv2_4417_72_7
Type: TC
Location: 9046 - 9819 (+)
Type: TC
Location: 9046 - 9819 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.