Cluster: HRGMv2_4417_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4417
- CGC Family ID: CGCFAM_01717
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4417_56 | HRGMv2_4417_56_4 | 3969 | 7004 | - | GH2 |
| TC | HRGMv2_4417_56 | HRGMv2_4417_56_5 | 7053 | 7658 | - | 9.B.18.1.2 |
| pfam | HRGMv2_4417_56 | HRGMv2_4417_56_6 | 7671 | 8273 | - | Cyclase |
| TC | HRGMv2_4417_56 | HRGMv2_4417_56_7 | 8550 | 11252 | + | 3.A.5.1.3 |
Gene ID: HRGMv2_4417_56_4
Type: CAZyme
Location: 3969 - 7004 (-)
Type: CAZyme
Location: 3969 - 7004 (-)
Gene ID: HRGMv2_4417_56_5
Type: TC
Location: 7053 - 7658 (-)
Type: TC
Location: 7053 - 7658 (-)
Gene ID: HRGMv2_4417_56_6
Type: pfam
Location: 7671 - 8273 (-)
Type: pfam
Location: 7671 - 8273 (-)
Gene ID: HRGMv2_4417_56_7
Type: TC
Location: 8550 - 11252 (+)
Type: TC
Location: 8550 - 11252 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.