Cluster: HRGMv2_4417_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4417
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4417_47 | HRGMv2_4417_47_2 | 543 | 1994 | - | 2.A.2.3.2 |
| CAZyme | HRGMv2_4417_47 | HRGMv2_4417_47_3 | 2192 | 4492 | - | GH31_15 |
| pfam | HRGMv2_4417_47 | HRGMv2_4417_47_4 | 4972 | 5406 | - | RbsD_FucU |
| CAZyme | HRGMv2_4417_47 | HRGMv2_4417_47_5 | 5427 | 7703 | - | GH95 |
Gene ID: HRGMv2_4417_47_2
Type: TC
Location: 543 - 1994 (-)
Type: TC
Location: 543 - 1994 (-)
Gene ID: HRGMv2_4417_47_3
Type: CAZyme
Location: 2192 - 4492 (-)
Type: CAZyme
Location: 2192 - 4492 (-)
Gene ID: HRGMv2_4417_47_4
Type: pfam
Location: 4972 - 5406 (-)
Type: pfam
Location: 4972 - 5406 (-)
Gene ID: HRGMv2_4417_47_5
Type: CAZyme
Location: 5427 - 7703 (-)
Type: CAZyme
Location: 5427 - 7703 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.