Cluster: HRGMv2_4416_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4416
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4416_16 | HRGMv2_4416_16_17 | 16026 | 17501 | + | GH39 |
| pfam | HRGMv2_4416_16 | HRGMv2_4416_16_18 | 17532 | 17903 | + | DUF1508 | DUF1508 |
| TF | HRGMv2_4416_16 | HRGMv2_4416_16_19 | 18034 | 18285 | - | HTH_3 |
| TC | HRGMv2_4416_16 | HRGMv2_4416_16_20 | 18677 | 19669 | + | 3.A.1.144.3 |
Gene ID: HRGMv2_4416_16_17
Type: CAZyme
Location: 16026 - 17501 (+)
Type: CAZyme
Location: 16026 - 17501 (+)
Gene ID: HRGMv2_4416_16_18
Type: pfam
Location: 17532 - 17903 (+)
Type: pfam
Location: 17532 - 17903 (+)
Gene ID: HRGMv2_4416_16_19
Type: TF
Location: 18034 - 18285 (-)
Type: TF
Location: 18034 - 18285 (-)
Gene ID: HRGMv2_4416_16_20
Type: TC
Location: 18677 - 19669 (+)
Type: TC
Location: 18677 - 19669 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
UMGS1384
Genus
CALWJF01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.