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Cluster: HRGMv2_4416_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4416_7 HRGMv2_4416_7_6 4427 5839 - 2.A.66.1.33
STP HRGMv2_4416_7 HRGMv2_4416_7_7 5849 6679 - NUDIX
pfam HRGMv2_4416_7 HRGMv2_4416_7_8 6739 7539 - AP_endonuc_2
CAZyme HRGMv2_4416_7 HRGMv2_4416_7_9 7616 9703 - GH105
TC HRGMv2_4416_7 HRGMv2_4416_7_10 9716 10696 - 8.A.5.1.4
pfam HRGMv2_4416_7 HRGMv2_4416_7_11 10977 12329 + FAD_binding_2 | GIDA | FAD_binding_3 | FAD_oxidored | NAD_binding_8
pfam HRGMv2_4416_7 HRGMv2_4416_7_12 12386 13225 + DUF2268
TC HRGMv2_4416_7 HRGMv2_4416_7_13 13259 14005 - 3.A.1.3.20
TC HRGMv2_4416_7 HRGMv2_4416_7_14 14002 14778 - 3.A.1.3.20
TC HRGMv2_4416_7 HRGMv2_4416_7_15 14860 15762 - 3.A.1.3.20
pfam HRGMv2_4416_7 HRGMv2_4416_7_16 16225 16704 - Acetyltransf_1 | FR47 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10
pfam HRGMv2_4416_7 HRGMv2_4416_7_17 16740 17414 - DUF2461
TC HRGMv2_4416_7 HRGMv2_4416_7_18 17727 18659 + 2.A.7.3.52
pfam HRGMv2_4416_7 HRGMv2_4416_7_19 18661 20154 + Mannitol_dh | Mannitol_dh_C
pfam HRGMv2_4416_7 HRGMv2_4416_7_20 20151 21635 + GD_AH_second | SAF | GD_AH_C
TC HRGMv2_4416_7 HRGMv2_4416_7_21 21647 22471 + 1.A.23.2.1
TC HRGMv2_4416_7 HRGMv2_4416_7_22 22684 23226 + 9.B.105.1.5
Gene ID: HRGMv2_4416_7_6
Type: TC
Location: 4427 - 5839 (-)
Gene ID: HRGMv2_4416_7_7
Type: STP
Location: 5849 - 6679 (-)
Gene ID: HRGMv2_4416_7_8
Type: pfam
Location: 6739 - 7539 (-)
Gene ID: HRGMv2_4416_7_9
Type: CAZyme
Location: 7616 - 9703 (-)
Gene ID: HRGMv2_4416_7_10
Type: TC
Location: 9716 - 10696 (-)
Gene ID: HRGMv2_4416_7_11
Type: pfam
Location: 10977 - 12329 (+)
Gene ID: HRGMv2_4416_7_12
Type: pfam
Location: 12386 - 13225 (+)
Gene ID: HRGMv2_4416_7_13
Type: TC
Location: 13259 - 14005 (-)
Gene ID: HRGMv2_4416_7_14
Type: TC
Location: 14002 - 14778 (-)
Gene ID: HRGMv2_4416_7_15
Type: TC
Location: 14860 - 15762 (-)
Gene ID: HRGMv2_4416_7_16
Type: pfam
Location: 16225 - 16704 (-)
Gene ID: HRGMv2_4416_7_17
Type: pfam
Location: 16740 - 17414 (-)
Gene ID: HRGMv2_4416_7_18
Type: TC
Location: 17727 - 18659 (+)
Gene ID: HRGMv2_4416_7_19
Type: pfam
Location: 18661 - 20154 (+)
Gene ID: HRGMv2_4416_7_20
Type: pfam
Location: 20151 - 21635 (+)
Gene ID: HRGMv2_4416_7_21
Type: TC
Location: 21647 - 22471 (+)
Gene ID: HRGMv2_4416_7_22
Type: TC
Location: 22684 - 23226 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
UMGS1384
→
Genus
CALWJF01
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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