Cluster: HRGMv2_4416_CGC4
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4416
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4416_5 | HRGMv2_4416_5_10 | 7795 | 8604 | - | CE1 |
| CAZyme | HRGMv2_4416_5 | HRGMv2_4416_5_11 | 8609 | 9391 | - | CE1 |
| NULL(UNKNOWN) | HRGMv2_4416_5 | HRGMv2_4416_5_12 | 9682 | 10251 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4416_5 | HRGMv2_4416_5_13 | 10248 | 10553 | + | DUF1294 |
| TC | HRGMv2_4416_5 | HRGMv2_4416_5_14 | 10596 | 12344 | + | 3.A.1.135.5 |
| TC | HRGMv2_4416_5 | HRGMv2_4416_5_15 | 12344 | 14248 | + | 3.A.1.135.5 |
| pfam | HRGMv2_4416_5 | HRGMv2_4416_5_16 | 14245 | 14859 | + | ACPS |
| TC | HRGMv2_4416_5 | HRGMv2_4416_5_17 | 14999 | 16468 | - | 2.A.21.2.4 |
Gene ID: HRGMv2_4416_5_10
Type: CAZyme
Location: 7795 - 8604 (-)
Type: CAZyme
Location: 7795 - 8604 (-)
Gene ID: HRGMv2_4416_5_11
Type: CAZyme
Location: 8609 - 9391 (-)
Type: CAZyme
Location: 8609 - 9391 (-)
Gene ID: HRGMv2_4416_5_12
Type:
Location: 9682 - 10251 (+)
Type:
Location: 9682 - 10251 (+)
Gene ID: HRGMv2_4416_5_13
Type: pfam
Location: 10248 - 10553 (+)
Type: pfam
Location: 10248 - 10553 (+)
Gene ID: HRGMv2_4416_5_14
Type: TC
Location: 10596 - 12344 (+)
Type: TC
Location: 10596 - 12344 (+)
Gene ID: HRGMv2_4416_5_15
Type: TC
Location: 12344 - 14248 (+)
Type: TC
Location: 12344 - 14248 (+)
Gene ID: HRGMv2_4416_5_16
Type: pfam
Location: 14245 - 14859 (+)
Type: pfam
Location: 14245 - 14859 (+)
Gene ID: HRGMv2_4416_5_17
Type: TC
Location: 14999 - 16468 (-)
Type: TC
Location: 14999 - 16468 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
UMGS1384
Genus
CALWJF01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.