Cluster: HRGMv2_4416_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4416
- CGC Family ID: CGCFAM_07379
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4416_4 | HRGMv2_4416_4_14 | 11926 | 13110 | - | 3.B.1.1.2 |
| TC | HRGMv2_4416_4 | HRGMv2_4416_4_15 | 13123 | 13854 | - | 3.B.1.1.2 |
| pfam | HRGMv2_4416_4 | HRGMv2_4416_4_16 | 13856 | 14239 | - | OAD_gamma |
| TC | HRGMv2_4416_4 | HRGMv2_4416_4_17 | 14252 | 15631 | - | 3.B.1.1.6 |
| pfam | HRGMv2_4416_4 | HRGMv2_4416_4_18 | 15878 | 17074 | - | Rce1-like |
| pfam | HRGMv2_4416_4 | HRGMv2_4416_4_19 | 17277 | 18023 | + | ATP_bind_3 |
| CAZyme | HRGMv2_4416_4 | HRGMv2_4416_4_20 | 18074 | 19114 | + | GT4 |
Gene ID: HRGMv2_4416_4_14
Type: TC
Location: 11926 - 13110 (-)
Type: TC
Location: 11926 - 13110 (-)
Gene ID: HRGMv2_4416_4_15
Type: TC
Location: 13123 - 13854 (-)
Type: TC
Location: 13123 - 13854 (-)
Gene ID: HRGMv2_4416_4_16
Type: pfam
Location: 13856 - 14239 (-)
Type: pfam
Location: 13856 - 14239 (-)
Gene ID: HRGMv2_4416_4_17
Type: TC
Location: 14252 - 15631 (-)
Type: TC
Location: 14252 - 15631 (-)
Gene ID: HRGMv2_4416_4_18
Type: pfam
Location: 15878 - 17074 (-)
Type: pfam
Location: 15878 - 17074 (-)
Gene ID: HRGMv2_4416_4_19
Type: pfam
Location: 17277 - 18023 (+)
Type: pfam
Location: 17277 - 18023 (+)
Gene ID: HRGMv2_4416_4_20
Type: CAZyme
Location: 18074 - 19114 (+)
Type: CAZyme
Location: 18074 - 19114 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
UMGS1384
Genus
CALWJF01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.