Cluster: HRGMv2_4416_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4416
- CGC Family ID: CGCFAM_10607
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4416_106 | HRGMv2_4416_106_2 | 417 | 1682 | + | GT2 |
| TC | HRGMv2_4416_106 | HRGMv2_4416_106_3 | 1821 | 2642 | - | 3.A.1.1.47 |
| TC | HRGMv2_4416_106 | HRGMv2_4416_106_4 | 2652 | 3569 | - | 3.A.1.1.11 |
| TC | HRGMv2_4416_106 | HRGMv2_4416_106_5 | 3566 | 4630 | - | 3.A.1.1.16 |
| STP | HRGMv2_4416_106 | HRGMv2_4416_106_6 | 4790 | 6166 | - | SBP_bac_1 |
| TC | HRGMv2_4416_106 | HRGMv2_4416_106_7 | 6364 | 8082 | - | 3.A.1.106.2 |
Gene ID: HRGMv2_4416_106_2
Type: CAZyme
Location: 417 - 1682 (+)
Type: CAZyme
Location: 417 - 1682 (+)
Gene ID: HRGMv2_4416_106_3
Type: TC
Location: 1821 - 2642 (-)
Type: TC
Location: 1821 - 2642 (-)
Gene ID: HRGMv2_4416_106_4
Type: TC
Location: 2652 - 3569 (-)
Type: TC
Location: 2652 - 3569 (-)
Gene ID: HRGMv2_4416_106_5
Type: TC
Location: 3566 - 4630 (-)
Type: TC
Location: 3566 - 4630 (-)
Gene ID: HRGMv2_4416_106_6
Type: STP
Location: 4790 - 6166 (-)
Type: STP
Location: 4790 - 6166 (-)
Gene ID: HRGMv2_4416_106_7
Type: TC
Location: 6364 - 8082 (-)
Type: TC
Location: 6364 - 8082 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
UMGS1384
Genus
CALWJF01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.