Cluster: HRGMv2_4416_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4416
- CGC Family ID: CGCFAM_02007
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4416_81 | HRGMv2_4416_81_3 | 2040 | 3479 | - | 2.A.66.1.33 |
| TC | HRGMv2_4416_81 | HRGMv2_4416_81_4 | 3697 | 5451 | - | 3.D.1.7.1 |
| TC | HRGMv2_4416_81 | HRGMv2_4416_81_5 | 5469 | 7322 | - | 3.D.1.5.1 |
| pfam | HRGMv2_4416_81 | HRGMv2_4416_81_6 | 7343 | 7840 | - | 2Fe-2S_thioredx |
| CAZyme | HRGMv2_4416_81 | HRGMv2_4416_81_7 | 8411 | 9256 | - | GH23 |
| CAZyme | HRGMv2_4416_81 | HRGMv2_4416_81_8 | 9397 | 10131 | + | CE4 |
Gene ID: HRGMv2_4416_81_3
Type: TC
Location: 2040 - 3479 (-)
Type: TC
Location: 2040 - 3479 (-)
Gene ID: HRGMv2_4416_81_4
Type: TC
Location: 3697 - 5451 (-)
Type: TC
Location: 3697 - 5451 (-)
Gene ID: HRGMv2_4416_81_5
Type: TC
Location: 5469 - 7322 (-)
Type: TC
Location: 5469 - 7322 (-)
Gene ID: HRGMv2_4416_81_6
Type: pfam
Location: 7343 - 7840 (-)
Type: pfam
Location: 7343 - 7840 (-)
Gene ID: HRGMv2_4416_81_7
Type: CAZyme
Location: 8411 - 9256 (-)
Type: CAZyme
Location: 8411 - 9256 (-)
Gene ID: HRGMv2_4416_81_8
Type: CAZyme
Location: 9397 - 10131 (+)
Type: CAZyme
Location: 9397 - 10131 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
UMGS1384
Genus
CALWJF01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.