Cluster: HRGMv2_4416_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4416
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4416_41 | HRGMv2_4416_41_1 | 3 | 527 | - | 2.A.25.1.3 |
| pfam | HRGMv2_4416_41 | HRGMv2_4416_41_2 | 966 | 2201 | - | CAP | Cu_amine_oxidN1 | CAP_assoc_N |
| pfam | HRGMv2_4416_41 | HRGMv2_4416_41_3 | 2213 | 3502 | - | PGA_cap |
| CAZyme | HRGMv2_4416_41 | HRGMv2_4416_41_4 | 3539 | 5965 | - | GT51 |
Gene ID: HRGMv2_4416_41_1
Type: TC
Location: 3 - 527 (-)
Type: TC
Location: 3 - 527 (-)
Gene ID: HRGMv2_4416_41_2
Type: pfam
Location: 966 - 2201 (-)
Type: pfam
Location: 966 - 2201 (-)
Gene ID: HRGMv2_4416_41_3
Type: pfam
Location: 2213 - 3502 (-)
Type: pfam
Location: 2213 - 3502 (-)
Gene ID: HRGMv2_4416_41_4
Type: CAZyme
Location: 3539 - 5965 (-)
Type: CAZyme
Location: 3539 - 5965 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
UMGS1384
Genus
CALWJF01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.