Cluster: HRGMv2_4416_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4416
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4416_33 | HRGMv2_4416_33_3 | 1982 | 3535 | - | 2.A.21.2.5 |
| TC | HRGMv2_4416_33 | HRGMv2_4416_33_4 | 3548 | 5182 | - | 4.C.1.1.4 |
| pfam | HRGMv2_4416_33 | HRGMv2_4416_33_5 | 5647 | 6087 | + | HSP20 |
| CAZyme | HRGMv2_4416_33 | HRGMv2_4416_33_6 | 6283 | 8727 | + | GH2 |
| pfam | HRGMv2_4416_33 | HRGMv2_4416_33_7 | 8778 | 10235 | + | Amidase |
| peptidase | HRGMv2_4416_33 | HRGMv2_4416_33_8 | 10838 | 11881 | - | S66.UPW |
| TC | HRGMv2_4416_33 | HRGMv2_4416_33_9 | 12076 | 12627 | - | 4.F.1.1.7 |
Gene ID: HRGMv2_4416_33_3
Type: TC
Location: 1982 - 3535 (-)
Type: TC
Location: 1982 - 3535 (-)
Gene ID: HRGMv2_4416_33_4
Type: TC
Location: 3548 - 5182 (-)
Type: TC
Location: 3548 - 5182 (-)
Gene ID: HRGMv2_4416_33_5
Type: pfam
Location: 5647 - 6087 (+)
Type: pfam
Location: 5647 - 6087 (+)
Gene ID: HRGMv2_4416_33_6
Type: CAZyme
Location: 6283 - 8727 (+)
Type: CAZyme
Location: 6283 - 8727 (+)
Gene ID: HRGMv2_4416_33_7
Type: pfam
Location: 8778 - 10235 (+)
Type: pfam
Location: 8778 - 10235 (+)
Gene ID: HRGMv2_4416_33_8
Type: peptidase
Location: 10838 - 11881 (-)
Type: peptidase
Location: 10838 - 11881 (-)
Gene ID: HRGMv2_4416_33_9
Type: TC
Location: 12076 - 12627 (-)
Type: TC
Location: 12076 - 12627 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
UMGS1384
Genus
CALWJF01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.