Cluster: HRGMv2_4416_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4416
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4416_1 | HRGMv2_4416_1_12 | 8610 | 16058 | + | GH94 | GT84 |
| TF | HRGMv2_4416_1 | HRGMv2_4416_1_13 | 16113 | 16538 | - | MarR |
| CAZyme | HRGMv2_4416_1 | HRGMv2_4416_1_14 | 16749 | 18347 | - | GH51_1 |
| TC | HRGMv2_4416_1 | HRGMv2_4416_1_15 | 18379 | 19761 | - | 2.A.66.1.28 |
| CAZyme | HRGMv2_4416_1 | HRGMv2_4416_1_16 | 19775 | 20914 | - | CE1 |
Gene ID: HRGMv2_4416_1_12
Type: CAZyme
Location: 8610 - 16058 (+)
Type: CAZyme
Location: 8610 - 16058 (+)
Gene ID: HRGMv2_4416_1_13
Type: TF
Location: 16113 - 16538 (-)
Type: TF
Location: 16113 - 16538 (-)
Gene ID: HRGMv2_4416_1_14
Type: CAZyme
Location: 16749 - 18347 (-)
Type: CAZyme
Location: 16749 - 18347 (-)
Gene ID: HRGMv2_4416_1_15
Type: TC
Location: 18379 - 19761 (-)
Type: TC
Location: 18379 - 19761 (-)
Gene ID: HRGMv2_4416_1_16
Type: CAZyme
Location: 19775 - 20914 (-)
Type: CAZyme
Location: 19775 - 20914 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
UMGS1384
Genus
CALWJF01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.