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Cluster: HRGMv2_4415_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4415_8 HRGMv2_4415_8_8 5683 6447 + 3.A.1.134.4
TC HRGMv2_4415_8 HRGMv2_4415_8_9 6444 8492 + 3.A.1.134.4
NULL(UNKNOWN) HRGMv2_4415_8 HRGMv2_4415_8_10 8489 8800 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4415_8 HRGMv2_4415_8_11 8800 9540 + GT51
STP HRGMv2_4415_8 HRGMv2_4415_8_12 9635 10531 - HATPase_c | HisKA
NULL(UNKNOWN) HRGMv2_4415_8 HRGMv2_4415_8_13 10542 11387 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4415_8 HRGMv2_4415_8_14 11380 12294 - 3.A.1.131.1
TF HRGMv2_4415_8 HRGMv2_4415_8_15 12374 13057 - Trans_reg_C
TF HRGMv2_4415_8 HRGMv2_4415_8_16 13201 13572 + GntR
TC HRGMv2_4415_8 HRGMv2_4415_8_17 13575 14411 + 3.A.1.149.1
Gene ID: HRGMv2_4415_8_8
Type: TC
Location: 5683 - 6447 (+)
Gene ID: HRGMv2_4415_8_9
Type: TC
Location: 6444 - 8492 (+)
Gene ID: HRGMv2_4415_8_10
Type:
Location: 8489 - 8800 (+)
Gene ID: HRGMv2_4415_8_11
Type: CAZyme
Location: 8800 - 9540 (+)
Gene ID: HRGMv2_4415_8_12
Type: STP
Location: 9635 - 10531 (-)
Gene ID: HRGMv2_4415_8_13
Type:
Location: 10542 - 11387 (-)
Gene ID: HRGMv2_4415_8_14
Type: TC
Location: 11380 - 12294 (-)
Gene ID: HRGMv2_4415_8_15
Type: TF
Location: 12374 - 13057 (-)
Gene ID: HRGMv2_4415_8_16
Type: TF
Location: 13201 - 13572 (+)
Gene ID: HRGMv2_4415_8_17
Type: TC
Location: 13575 - 14411 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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