Cluster: HRGMv2_4411_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4411
- CGC Family ID: CGCFAM_00022
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4411_10 | HRGMv2_4411_10_24 | 22101 | 23303 | - | GT4 |
| pfam | HRGMv2_4411_10 | HRGMv2_4411_10_25 | 23317 | 24336 | - | Acyl_transf_3 |
| CAZyme | HRGMv2_4411_10 | HRGMv2_4411_10_26 | 24488 | 25621 | - | GT4 |
| TC | HRGMv2_4411_10 | HRGMv2_4411_10_27 | 25862 | 26545 | - | 9.B.18.1.2 |
| TC | HRGMv2_4411_10 | HRGMv2_4411_10_28 | 26715 | 27419 | - | 8.A.3.2.3 |
Gene ID: HRGMv2_4411_10_24
Type: CAZyme
Location: 22101 - 23303 (-)
Type: CAZyme
Location: 22101 - 23303 (-)
Gene ID: HRGMv2_4411_10_25
Type: pfam
Location: 23317 - 24336 (-)
Type: pfam
Location: 23317 - 24336 (-)
Gene ID: HRGMv2_4411_10_26
Type: CAZyme
Location: 24488 - 25621 (-)
Type: CAZyme
Location: 24488 - 25621 (-)
Gene ID: HRGMv2_4411_10_27
Type: TC
Location: 25862 - 26545 (-)
Type: TC
Location: 25862 - 26545 (-)
Gene ID: HRGMv2_4411_10_28
Type: TC
Location: 26715 - 27419 (-)
Type: TC
Location: 26715 - 27419 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp904393835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.