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Cluster: HRGMv2_4411_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4411_7 HRGMv2_4411_7_14 10785 12134 - GH25
TC HRGMv2_4411_7 HRGMv2_4411_7_15 12587 13588 + 3.A.1.141.1
TC HRGMv2_4411_7 HRGMv2_4411_7_16 13591 14409 + 3.A.1.141.2
TC HRGMv2_4411_7 HRGMv2_4411_7_17 14412 15212 + 3.A.1.141.2
STP HRGMv2_4411_7 HRGMv2_4411_7_18 15306 16076 - Response_reg | Spo0A_C
peptidase HRGMv2_4411_7 HRGMv2_4411_7_19 16223 17233 - S55.001
TC HRGMv2_4411_7 HRGMv2_4411_7_20 17417 19801 + 3.A.3.23.2
Gene ID: HRGMv2_4411_7_14
Type: CAZyme
Location: 10785 - 12134 (-)
Gene ID: HRGMv2_4411_7_15
Type: TC
Location: 12587 - 13588 (+)
Gene ID: HRGMv2_4411_7_16
Type: TC
Location: 13591 - 14409 (+)
Gene ID: HRGMv2_4411_7_17
Type: TC
Location: 14412 - 15212 (+)
Gene ID: HRGMv2_4411_7_18
Type: STP
Location: 15306 - 16076 (-)
Gene ID: HRGMv2_4411_7_19
Type: peptidase
Location: 16223 - 17233 (-)
Gene ID: HRGMv2_4411_7_20
Type: TC
Location: 17417 - 19801 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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