Cluster: HRGMv2_4411_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4411
- CGC Family ID: CGCFAM_02981
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4411_5 | HRGMv2_4411_5_44 | 52143 | 52847 | - | 3.A.1.132.4 |
| TC | HRGMv2_4411_5 | HRGMv2_4411_5_45 | 52847 | 53809 | - | 3.A.1.132.1 |
| pfam | HRGMv2_4411_5 | HRGMv2_4411_5_46 | 54080 | 54433 | + | SpoVAC_SpoVAEB |
| TC | HRGMv2_4411_5 | HRGMv2_4411_5_47 | 54477 | 57170 | - | 9.B.144.1.5 |
| CAZyme | HRGMv2_4411_5 | HRGMv2_4411_5_48 | 57377 | 58351 | + | GT2 |
Gene ID: HRGMv2_4411_5_44
Type: TC
Location: 52143 - 52847 (-)
Type: TC
Location: 52143 - 52847 (-)
Gene ID: HRGMv2_4411_5_45
Type: TC
Location: 52847 - 53809 (-)
Type: TC
Location: 52847 - 53809 (-)
Gene ID: HRGMv2_4411_5_46
Type: pfam
Location: 54080 - 54433 (+)
Type: pfam
Location: 54080 - 54433 (+)
Gene ID: HRGMv2_4411_5_47
Type: TC
Location: 54477 - 57170 (-)
Type: TC
Location: 54477 - 57170 (-)
Gene ID: HRGMv2_4411_5_48
Type: CAZyme
Location: 57377 - 58351 (+)
Type: CAZyme
Location: 57377 - 58351 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp904393835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.