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Cluster: HRGMv2_4411_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4411_3 HRGMv2_4411_3_60 64526 65098 + 3.A.1.25.3
TF HRGMv2_4411_3 HRGMv2_4411_3_61 65253 65630 + GntR
TC HRGMv2_4411_3 HRGMv2_4411_3_62 65623 66525 + 3.A.1.132.6
NULL(UNKNOWN) HRGMv2_4411_3 HRGMv2_4411_3_63 66500 68419 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4411_3 HRGMv2_4411_3_64 68423 68968 + tRNA_edit
CAZyme HRGMv2_4411_3 HRGMv2_4411_3_65 69090 69896 - CE4
pfam HRGMv2_4411_3 HRGMv2_4411_3_66 69949 71358 - tRNA-synt_1e | CysS_C
pfam HRGMv2_4411_3 HRGMv2_4411_3_67 71364 72011 - Hexapep | SATase_N | Hexapep_2
TC HRGMv2_4411_3 HRGMv2_4411_3_68 72036 72626 - 4.F.1.1.7
Gene ID: HRGMv2_4411_3_60
Type: TC
Location: 64526 - 65098 (+)
Gene ID: HRGMv2_4411_3_61
Type: TF
Location: 65253 - 65630 (+)
Gene ID: HRGMv2_4411_3_62
Type: TC
Location: 65623 - 66525 (+)
Gene ID: HRGMv2_4411_3_63
Type:
Location: 66500 - 68419 (+)
Gene ID: HRGMv2_4411_3_64
Type: pfam
Location: 68423 - 68968 (+)
Gene ID: HRGMv2_4411_3_65
Type: CAZyme
Location: 69090 - 69896 (-)
Gene ID: HRGMv2_4411_3_66
Type: pfam
Location: 69949 - 71358 (-)
Gene ID: HRGMv2_4411_3_67
Type: pfam
Location: 71364 - 72011 (-)
Gene ID: HRGMv2_4411_3_68
Type: TC
Location: 72036 - 72626 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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