Cluster: HRGMv2_4411_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4411
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4411_2 | HRGMv2_4411_2_107 | 113711 | 114358 | - | 2.A.38.4.6 |
| TC | HRGMv2_4411_2 | HRGMv2_4411_2_108 | 114373 | 115710 | - | 2.A.38.4.1 |
| pfam | HRGMv2_4411_2 | HRGMv2_4411_2_109 | 116313 | 117143 | + | AP_endonuc_2 |
| CAZyme | HRGMv2_4411_2 | HRGMv2_4411_2_110 | 117380 | 119953 | + | CBM26 | GH13_28 |
Gene ID: HRGMv2_4411_2_107
Type: TC
Location: 113711 - 114358 (-)
Type: TC
Location: 113711 - 114358 (-)
Gene ID: HRGMv2_4411_2_108
Type: TC
Location: 114373 - 115710 (-)
Type: TC
Location: 114373 - 115710 (-)
Gene ID: HRGMv2_4411_2_109
Type: pfam
Location: 116313 - 117143 (+)
Type: pfam
Location: 116313 - 117143 (+)
Gene ID: HRGMv2_4411_2_110
Type: CAZyme
Location: 117380 - 119953 (+)
Type: CAZyme
Location: 117380 - 119953 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp904393835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.