Cluster: HRGMv2_4411_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4411
- CGC Family ID: CGCFAM_03599
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4411_23 | HRGMv2_4411_23_13 | 14966 | 16030 | + | GT2 |
| pfam | HRGMv2_4411_23 | HRGMv2_4411_23_14 | 16044 | 16907 | + | LicD |
| pfam | HRGMv2_4411_23 | HRGMv2_4411_23_15 | 16912 | 17637 | + | DNA_alkylation |
| TC | HRGMv2_4411_23 | HRGMv2_4411_23_16 | 17905 | 18615 | + | 3.A.1.25.6 |
Gene ID: HRGMv2_4411_23_13
Type: CAZyme
Location: 14966 - 16030 (+)
Type: CAZyme
Location: 14966 - 16030 (+)
Gene ID: HRGMv2_4411_23_14
Type: pfam
Location: 16044 - 16907 (+)
Type: pfam
Location: 16044 - 16907 (+)
Gene ID: HRGMv2_4411_23_15
Type: pfam
Location: 16912 - 17637 (+)
Type: pfam
Location: 16912 - 17637 (+)
Gene ID: HRGMv2_4411_23_16
Type: TC
Location: 17905 - 18615 (+)
Type: TC
Location: 17905 - 18615 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp904393835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.