Cluster: HRGMv2_4411_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4411
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4411_22 | HRGMv2_4411_22_15 | 11788 | 12864 | - | 3.A.1.11.7 |
| TC | HRGMv2_4411_22 | HRGMv2_4411_22_16 | 12937 | 13764 | - | 3.A.1.11.8 |
| TC | HRGMv2_4411_22 | HRGMv2_4411_22_17 | 13761 | 14552 | - | 3.A.1.11.2 |
| TC | HRGMv2_4411_22 | HRGMv2_4411_22_18 | 14553 | 15974 | - | 3.A.1.11.8 |
| CAZyme | HRGMv2_4411_22 | HRGMv2_4411_22_19 | 16418 | 19576 | + | GH13_28 |
Gene ID: HRGMv2_4411_22_15
Type: TC
Location: 11788 - 12864 (-)
Type: TC
Location: 11788 - 12864 (-)
Gene ID: HRGMv2_4411_22_16
Type: TC
Location: 12937 - 13764 (-)
Type: TC
Location: 12937 - 13764 (-)
Gene ID: HRGMv2_4411_22_17
Type: TC
Location: 13761 - 14552 (-)
Type: TC
Location: 13761 - 14552 (-)
Gene ID: HRGMv2_4411_22_18
Type: TC
Location: 14553 - 15974 (-)
Type: TC
Location: 14553 - 15974 (-)
Gene ID: HRGMv2_4411_22_19
Type: CAZyme
Location: 16418 - 19576 (+)
Type: CAZyme
Location: 16418 - 19576 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp904393835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.