Cluster: HRGMv2_4411_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4411
- CGC Family ID: CGCFAM_10086
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4411_12 | HRGMv2_4411_12_55 | 51640 | 53601 | + | 4.A.2.1.20 |
| TC | HRGMv2_4411_12 | HRGMv2_4411_12_56 | 53694 | 53957 | + | 8.A.8.1.6 |
| TC | HRGMv2_4411_12 | HRGMv2_4411_12_57 | 53993 | 55693 | + | 8.A.7.1.1 |
| NULL(UNKNOWN) | HRGMv2_4411_12 | HRGMv2_4411_12_58 | 55886 | 56722 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4411_12 | HRGMv2_4411_12_59 | 56871 | 57863 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4411_12 | HRGMv2_4411_12_60 | 58071 | 59438 | - | GH13_20 |
Gene ID: HRGMv2_4411_12_55
Type: TC
Location: 51640 - 53601 (+)
Type: TC
Location: 51640 - 53601 (+)
Gene ID: HRGMv2_4411_12_56
Type: TC
Location: 53694 - 53957 (+)
Type: TC
Location: 53694 - 53957 (+)
Gene ID: HRGMv2_4411_12_57
Type: TC
Location: 53993 - 55693 (+)
Type: TC
Location: 53993 - 55693 (+)
Gene ID: HRGMv2_4411_12_58
Type:
Location: 55886 - 56722 (+)
Type:
Location: 55886 - 56722 (+)
Gene ID: HRGMv2_4411_12_59
Type:
Location: 56871 - 57863 (+)
Type:
Location: 56871 - 57863 (+)
Gene ID: HRGMv2_4411_12_60
Type: CAZyme
Location: 58071 - 59438 (-)
Type: CAZyme
Location: 58071 - 59438 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp904393835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.