Cluster: HRGMv2_4411_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4411
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4411_11 | HRGMv2_4411_11_21 | 15569 | 20974 | - | CBM25 | CBM25 | CBM25 |
| pfam | HRGMv2_4411_11 | HRGMv2_4411_11_22 | 21480 | 21872 | - | ABC_trans_CmpB |
| pfam | HRGMv2_4411_11 | HRGMv2_4411_11_23 | 21922 | 22512 | - | DUF4093 |
| TC | HRGMv2_4411_11 | HRGMv2_4411_11_24 | 22655 | 23701 | - | 8.A.5.1.6 |
Gene ID: HRGMv2_4411_11_21
Type: CAZyme
Location: 15569 - 20974 (-)
Type: CAZyme
Location: 15569 - 20974 (-)
Gene ID: HRGMv2_4411_11_22
Type: pfam
Location: 21480 - 21872 (-)
Type: pfam
Location: 21480 - 21872 (-)
Gene ID: HRGMv2_4411_11_23
Type: pfam
Location: 21922 - 22512 (-)
Type: pfam
Location: 21922 - 22512 (-)
Gene ID: HRGMv2_4411_11_24
Type: TC
Location: 22655 - 23701 (-)
Type: TC
Location: 22655 - 23701 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp904393835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.