Cluster: HRGMv2_4411_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4411
- CGC Family ID: CGCFAM_04066
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4411_2 | HRGMv2_4411_2_82 | 84660 | 85787 | - | GT28 |
| pfam | HRGMv2_4411_2 | HRGMv2_4411_2_83 | 86203 | 87975 | + | VanW | PG_binding_4 |
| TC | HRGMv2_4411_2 | HRGMv2_4411_2_84 | 88032 | 89042 | + | 9.A.11.1.1 |
Gene ID: HRGMv2_4411_2_82
Type: CAZyme
Location: 84660 - 85787 (-)
Type: CAZyme
Location: 84660 - 85787 (-)
Gene ID: HRGMv2_4411_2_83
Type: pfam
Location: 86203 - 87975 (+)
Type: pfam
Location: 86203 - 87975 (+)
Gene ID: HRGMv2_4411_2_84
Type: TC
Location: 88032 - 89042 (+)
Type: TC
Location: 88032 - 89042 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp904393835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.