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Cluster: HRGMv2_4410_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4410_88 HRGMv2_4410_88_1 2 181 + 3.A.1.5.39
TC HRGMv2_4410_88 HRGMv2_4410_88_2 207 1181 + 3.A.1.5.2
TC HRGMv2_4410_88 HRGMv2_4410_88_3 1183 2130 + 3.A.1.5.20
pfam HRGMv2_4410_88 HRGMv2_4410_88_4 2154 2984 + Lactamase_B
NULL(UNKNOWN) HRGMv2_4410_88 HRGMv2_4410_88_5 3018 3698 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4410_88 HRGMv2_4410_88_6 3794 4834 + GH3
pfam HRGMv2_4410_88 HRGMv2_4410_88_7 4887 6134 - PFK
pfam HRGMv2_4410_88 HRGMv2_4410_88_8 6323 7276 + F_bP_aldolase
TC HRGMv2_4410_88 HRGMv2_4410_88_9 7335 8933 - 3.A.3.5.15
Gene ID: HRGMv2_4410_88_1
Type: TC
Location: 2 - 181 (+)
Gene ID: HRGMv2_4410_88_2
Type: TC
Location: 207 - 1181 (+)
Gene ID: HRGMv2_4410_88_3
Type: TC
Location: 1183 - 2130 (+)
Gene ID: HRGMv2_4410_88_4
Type: pfam
Location: 2154 - 2984 (+)
Gene ID: HRGMv2_4410_88_5
Type:
Location: 3018 - 3698 (+)
Gene ID: HRGMv2_4410_88_6
Type: CAZyme
Location: 3794 - 4834 (+)
Gene ID: HRGMv2_4410_88_7
Type: pfam
Location: 4887 - 6134 (-)
Gene ID: HRGMv2_4410_88_8
Type: pfam
Location: 6323 - 7276 (+)
Gene ID: HRGMv2_4410_88_9
Type: TC
Location: 7335 - 8933 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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