Cluster: HRGMv2_4410_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4410
- CGC Family ID: CGCFAM_10603
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4410_38 | HRGMv2_4410_38_13 | 13481 | 14344 | + | GH25 |
| pfam | HRGMv2_4410_38 | HRGMv2_4410_38_14 | 14415 | 14693 | - | DUF2085 |
| TF | HRGMv2_4410_38 | HRGMv2_4410_38_15 | 14860 | 15096 | + | HTH_3 |
| TC | HRGMv2_4410_38 | HRGMv2_4410_38_16 | 15138 | 16490 | - | 2.A.26.1.3 |
Gene ID: HRGMv2_4410_38_13
Type: CAZyme
Location: 13481 - 14344 (+)
Type: CAZyme
Location: 13481 - 14344 (+)
Gene ID: HRGMv2_4410_38_14
Type: pfam
Location: 14415 - 14693 (-)
Type: pfam
Location: 14415 - 14693 (-)
Gene ID: HRGMv2_4410_38_15
Type: TF
Location: 14860 - 15096 (+)
Type: TF
Location: 14860 - 15096 (+)
Gene ID: HRGMv2_4410_38_16
Type: TC
Location: 15138 - 16490 (-)
Type: TC
Location: 15138 - 16490 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
RGIG7114
Species
RGIG7114 sp938023775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4410_38_16 | vegetarian > vegan | 1.17367 | 0.00861 |