Cluster: HRGMv2_4410_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4410
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4410_5 | HRGMv2_4410_5_17 | 18725 | 19519 | - | 3.A.1.34.1 |
| TC | HRGMv2_4410_5 | HRGMv2_4410_5_18 | 19512 | 20441 | - | 3.A.1.34.1 |
| pfam | HRGMv2_4410_5 | HRGMv2_4410_5_19 | 20541 | 21572 | - | ABC_sub_bind |
| NULL(UNKNOWN) | HRGMv2_4410_5 | HRGMv2_4410_5_20 | 21691 | 21798 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4410_5 | HRGMv2_4410_5_21 | 21985 | 25305 | - | GH13_39 | GT5 |
Gene ID: HRGMv2_4410_5_17
Type: TC
Location: 18725 - 19519 (-)
Type: TC
Location: 18725 - 19519 (-)
Gene ID: HRGMv2_4410_5_18
Type: TC
Location: 19512 - 20441 (-)
Type: TC
Location: 19512 - 20441 (-)
Gene ID: HRGMv2_4410_5_19
Type: pfam
Location: 20541 - 21572 (-)
Type: pfam
Location: 20541 - 21572 (-)
Gene ID: HRGMv2_4410_5_20
Type:
Location: 21691 - 21798 (-)
Type:
Location: 21691 - 21798 (-)
Gene ID: HRGMv2_4410_5_21
Type: CAZyme
Location: 21985 - 25305 (-)
Type: CAZyme
Location: 21985 - 25305 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
RGIG7114
Species
RGIG7114 sp938023775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.