Cluster: HRGMv2_4409_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4409
- CGC Family ID: CGCFAM_00084
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4409_10 | HRGMv2_4409_10_2 | 1085 | 2212 | - | GT28 |
| NULL(UNKNOWN) | HRGMv2_4409_10 | HRGMv2_4409_10_3 | 2313 | 2846 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4409_10 | HRGMv2_4409_10_4 | 2851 | 3018 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4409_10 | HRGMv2_4409_10_5 | 3064 | 4365 | - | 2.A.103.1.3 |
| TC | HRGMv2_4409_10 | HRGMv2_4409_10_6 | 4398 | 5405 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_4409_10_2
Type: CAZyme
Location: 1085 - 2212 (-)
Type: CAZyme
Location: 1085 - 2212 (-)
Gene ID: HRGMv2_4409_10_3
Type:
Location: 2313 - 2846 (+)
Type:
Location: 2313 - 2846 (+)
Gene ID: HRGMv2_4409_10_4
Type:
Location: 2851 - 3018 (+)
Type:
Location: 2851 - 3018 (+)
Gene ID: HRGMv2_4409_10_5
Type: TC
Location: 3064 - 4365 (-)
Type: TC
Location: 3064 - 4365 (-)
Gene ID: HRGMv2_4409_10_6
Type: TC
Location: 4398 - 5405 (-)
Type: TC
Location: 4398 - 5405 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp945929845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4409_10_6 | vegan > omnivore | 1.44249 | 0.00455 |