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Cluster: HRGMv2_4409_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4409_7 HRGMv2_4409_7_4 3253 4266 - 3.A.1.132.9
CAZyme HRGMv2_4409_7 HRGMv2_4409_7_5 4841 6913 + CBM48 | GH13_9
pfam HRGMv2_4409_7 HRGMv2_4409_7_6 6910 8094 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_4409_7 HRGMv2_4409_7_7 8109 9242 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_4409_7 HRGMv2_4409_7_8 9256 11157 + GT5
CAZyme HRGMv2_4409_7 HRGMv2_4409_7_9 11234 13288 - GH13_39
CAZyme HRGMv2_4409_7 HRGMv2_4409_7_10 13338 15764 - GT35
TC HRGMv2_4409_7 HRGMv2_4409_7_11 15963 16736 - 3.A.1.3.25
TC HRGMv2_4409_7 HRGMv2_4409_7_12 17047 18438 - 3.A.1.3.15
TC HRGMv2_4409_7 HRGMv2_4409_7_13 18620 19447 - 3.A.1.3.27
Gene ID: HRGMv2_4409_7_4
Type: TC
Location: 3253 - 4266 (-)
Gene ID: HRGMv2_4409_7_5
Type: CAZyme
Location: 4841 - 6913 (+)
Gene ID: HRGMv2_4409_7_6
Type: pfam
Location: 6910 - 8094 (+)
Gene ID: HRGMv2_4409_7_7
Type: pfam
Location: 8109 - 9242 (+)
Gene ID: HRGMv2_4409_7_8
Type: CAZyme
Location: 9256 - 11157 (+)
Gene ID: HRGMv2_4409_7_9
Type: CAZyme
Location: 11234 - 13288 (-)
Gene ID: HRGMv2_4409_7_10
Type: CAZyme
Location: 13338 - 15764 (-)
Gene ID: HRGMv2_4409_7_11
Type: TC
Location: 15963 - 16736 (-)
Gene ID: HRGMv2_4409_7_12
Type: TC
Location: 17047 - 18438 (-)
Gene ID: HRGMv2_4409_7_13
Type: TC
Location: 18620 - 19447 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
CAG-448
→
Species
CAG-448 sp945929845

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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