Cluster: HRGMv2_4409_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4409
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4409_6 | HRGMv2_4409_6_15 | 16570 | 18252 | - | GH78 |
| TC | HRGMv2_4409_6 | HRGMv2_4409_6_16 | 19006 | 20976 | - | 3.A.1.135.5 |
| TC | HRGMv2_4409_6 | HRGMv2_4409_6_17 | 20969 | 22879 | - | 3.A.1.135.5 |
Gene ID: HRGMv2_4409_6_15
Type: CAZyme
Location: 16570 - 18252 (-)
Type: CAZyme
Location: 16570 - 18252 (-)
Gene ID: HRGMv2_4409_6_16
Type: TC
Location: 19006 - 20976 (-)
Type: TC
Location: 19006 - 20976 (-)
Gene ID: HRGMv2_4409_6_17
Type: TC
Location: 20969 - 22879 (-)
Type: TC
Location: 20969 - 22879 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp945929845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4409_6_15 | vegan > omnivore | 1.63291 | 0.00455 |