Cluster: HRGMv2_4409_CGC21
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4409
- CGC Family ID: CGCFAM_06563
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4409_111 | HRGMv2_4409_111_2 | 950 | 2329 | - | 2.A.66.1.10 |
| pfam | HRGMv2_4409_111 | HRGMv2_4409_111_3 | 3283 | 4257 | + | Radical_SAM | Radical_SAM_C |
| CAZyme | HRGMv2_4409_111 | HRGMv2_4409_111_4 | 4302 | 6449 | + | CBM67 | GH78 |
Gene ID: HRGMv2_4409_111_2
Type: TC
Location: 950 - 2329 (-)
Type: TC
Location: 950 - 2329 (-)
Gene ID: HRGMv2_4409_111_3
Type: pfam
Location: 3283 - 4257 (+)
Type: pfam
Location: 3283 - 4257 (+)
Gene ID: HRGMv2_4409_111_4
Type: CAZyme
Location: 4302 - 6449 (+)
Type: CAZyme
Location: 4302 - 6449 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp945929845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.