Cluster: HRGMv2_4409_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4409
- CGC Family ID: CGCFAM_00857
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4409_26 | HRGMv2_4409_26_12 | 18646 | 20877 | - | CBM67 | GH78 |
| pfam | HRGMv2_4409_26 | HRGMv2_4409_26_13 | 21116 | 21994 | + | AP_endonuc_2 |
| NULL(UNKNOWN) | HRGMv2_4409_26 | HRGMv2_4409_26_14 | 22105 | 22533 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4409_26 | HRGMv2_4409_26_15 | 22808 | 24961 | - | 9.A.8.1.5 |
Gene ID: HRGMv2_4409_26_12
Type: CAZyme
Location: 18646 - 20877 (-)
Type: CAZyme
Location: 18646 - 20877 (-)
Gene ID: HRGMv2_4409_26_13
Type: pfam
Location: 21116 - 21994 (+)
Type: pfam
Location: 21116 - 21994 (+)
Gene ID: HRGMv2_4409_26_14
Type:
Location: 22105 - 22533 (-)
Type:
Location: 22105 - 22533 (-)
Gene ID: HRGMv2_4409_26_15
Type: TC
Location: 22808 - 24961 (-)
Type: TC
Location: 22808 - 24961 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp945929845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.