Cluster: HRGMv2_4409_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4409
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4409_21 | HRGMv2_4409_21_3 | 1585 | 5469 | + | CBM32 |
| pfam | HRGMv2_4409_21 | HRGMv2_4409_21_4 | 5603 | 7393 | + | NFACT-R_1 | NFACT_N | NFACT-R_2 |
| pfam | HRGMv2_4409_21 | HRGMv2_4409_21_5 | 7884 | 9284 | + | tRNA-synt_2b | HGTP_anticodon | ProRS-C_1 |
| TC | HRGMv2_4409_21 | HRGMv2_4409_21_6 | 9541 | 10659 | + | 2.A.103.1.3 |
Gene ID: HRGMv2_4409_21_3
Type: CAZyme
Location: 1585 - 5469 (+)
Type: CAZyme
Location: 1585 - 5469 (+)
Gene ID: HRGMv2_4409_21_4
Type: pfam
Location: 5603 - 7393 (+)
Type: pfam
Location: 5603 - 7393 (+)
Gene ID: HRGMv2_4409_21_5
Type: pfam
Location: 7884 - 9284 (+)
Type: pfam
Location: 7884 - 9284 (+)
Gene ID: HRGMv2_4409_21_6
Type: TC
Location: 9541 - 10659 (+)
Type: TC
Location: 9541 - 10659 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp945929845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.