Cluster: HRGMv2_4409_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4409
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4409_1 | HRGMv2_4409_1_29 | 28611 | 29930 | - | 9.A.40.2.2 |
| TC | HRGMv2_4409_1 | HRGMv2_4409_1_30 | 29927 | 31438 | - | 9.A.40.2.1 |
| TC | HRGMv2_4409_1 | HRGMv2_4409_1_31 | 31689 | 32294 | - | 2.A.115.2.14 |
| pfam | HRGMv2_4409_1 | HRGMv2_4409_1_32 | 32440 | 33006 | - | Acetyltransf_1 |
| pfam | HRGMv2_4409_1 | HRGMv2_4409_1_33 | 33059 | 33985 | - | PAP2 | PAP2_3 |
| CAZyme | HRGMv2_4409_1 | HRGMv2_4409_1_34 | 34024 | 35490 | - | GH20 |
Gene ID: HRGMv2_4409_1_29
Type: TC
Location: 28611 - 29930 (-)
Type: TC
Location: 28611 - 29930 (-)
Gene ID: HRGMv2_4409_1_30
Type: TC
Location: 29927 - 31438 (-)
Type: TC
Location: 29927 - 31438 (-)
Gene ID: HRGMv2_4409_1_31
Type: TC
Location: 31689 - 32294 (-)
Type: TC
Location: 31689 - 32294 (-)
Gene ID: HRGMv2_4409_1_32
Type: pfam
Location: 32440 - 33006 (-)
Type: pfam
Location: 32440 - 33006 (-)
Gene ID: HRGMv2_4409_1_33
Type: pfam
Location: 33059 - 33985 (-)
Type: pfam
Location: 33059 - 33985 (-)
Gene ID: HRGMv2_4409_1_34
Type: CAZyme
Location: 34024 - 35490 (-)
Type: CAZyme
Location: 34024 - 35490 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp945929845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.