Cluster: HRGMv2_4407_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4407
- CGC Family ID: CGCFAM_00252
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4407_104 | HRGMv2_4407_104_6 | 5359 | 6066 | - | 3.A.1.125.2 |
| NULL(UNKNOWN) | HRGMv2_4407_104 | HRGMv2_4407_104_7 | 6089 | 6289 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4407_104 | HRGMv2_4407_104_8 | 6305 | 7123 | - | Acyltransferase |
| TC | HRGMv2_4407_104 | HRGMv2_4407_104_9 | 7117 | 8790 | - | 4.C.1.1.4 |
| CAZyme | HRGMv2_4407_104 | HRGMv2_4407_104_10 | 8840 | 9193 | - | GT4 |
Gene ID: HRGMv2_4407_104_6
Type: TC
Location: 5359 - 6066 (-)
Type: TC
Location: 5359 - 6066 (-)
Gene ID: HRGMv2_4407_104_7
Type:
Location: 6089 - 6289 (-)
Type:
Location: 6089 - 6289 (-)
Gene ID: HRGMv2_4407_104_8
Type: pfam
Location: 6305 - 7123 (-)
Type: pfam
Location: 6305 - 7123 (-)
Gene ID: HRGMv2_4407_104_9
Type: TC
Location: 7117 - 8790 (-)
Type: TC
Location: 7117 - 8790 (-)
Gene ID: HRGMv2_4407_104_10
Type: CAZyme
Location: 8840 - 9193 (-)
Type: CAZyme
Location: 8840 - 9193 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
JAJPXI01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.