Cluster: HRGMv2_4407_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4407
- CGC Family ID: CGCFAM_00085
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4407_88 | HRGMv2_4407_88_9 | 5930 | 7006 | - | GT4 |
| CAZyme | HRGMv2_4407_88 | HRGMv2_4407_88_10 | 7003 | 9237 | - | GT4 |
| pfam | HRGMv2_4407_88 | HRGMv2_4407_88_11 | 9365 | 9895 | + | DUF4330 |
| TC | HRGMv2_4407_88 | HRGMv2_4407_88_12 | 9900 | 10439 | + | 9.B.105.1.3 |
Gene ID: HRGMv2_4407_88_9
Type: CAZyme
Location: 5930 - 7006 (-)
Type: CAZyme
Location: 5930 - 7006 (-)
Gene ID: HRGMv2_4407_88_10
Type: CAZyme
Location: 7003 - 9237 (-)
Type: CAZyme
Location: 7003 - 9237 (-)
Gene ID: HRGMv2_4407_88_11
Type: pfam
Location: 9365 - 9895 (+)
Type: pfam
Location: 9365 - 9895 (+)
Gene ID: HRGMv2_4407_88_12
Type: TC
Location: 9900 - 10439 (+)
Type: TC
Location: 9900 - 10439 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
JAJPXI01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.